------- SECIS element -- id:1 -- grade:B ----
 Chromosome = CM007941.1:subseq_51222165,116727_ Strand = + Positions = 24162 - 24234
 Found by:  Infernal (score=15.28) Covels (score=10.65)
 Stem2 length = 10   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -18.54

         ..(((((((.......(((((((((((((((.................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         .({(((({(---....([[{((((((((((------((((.....))))))))))))))}]]).......-...)}))))}).
 target  UGCAGUCUG---CAUUUGAUUGAUUAACUA------CUCACACCAUGAGUAGUUAAUCAUGAAACAUACA-CCCCCGACUUCC
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------- SECIS element -- id:2 -- grade:C ----
 Chromosome = CM007941.1:subseq_51222165,116727_ Strand = + Positions = 81121 - 81210
 Found by:  Infernal (score=12.24) Covels (score=1.31)
 Stem2 length = 11   Apical loop length = 21   Insertion in stem2 = 0, 0
 Free Energy = -21.41

         ..(((((((..........(((((((((((((((.......................)))))))))))))))..........)))))))..
 model   uucggucaugcg---UuaAUGAcGgccuggcccuAAAcC--------cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ...((((((..........([[{{(((((((((((.....................)))))))))))}}]])......-...))))))...
 target  CCUGGCCCUCUGUGCUUUAUGAUGGGCUGCAUGUACACUGCCACCACCACCACUUCUGUAUGCAGCUGUGAGCCAGAG-AUUGGGGCCUCU
                            ****                                             ****                   

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = CM007941.1:subseq_51222165,116727_ Strand = - Positions = 100988 - 100899
 Found by:  Infernal (score=10.14)
 Stem2 length = 9   Apical loop length = 27   Insertion in stem2 = 0, 0
 Free Energy = -7.95

         ..(((((((.......(((((((((((((((...........................)))))))))))))))............)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC------------cuuuuuggggcgggccaggcCuGAUGuu---u-uuucaugaccggc
         ..(({((((---(...{[[[((((({(({((...........................))}))})))))]]]}........-..)))))}))..
 target  GUUGCAGUA---GCCAUGAAAUGAUCAGCCUCAGCUAAUGGCUCUUAUCUCCGCUGCAAGACUUAUCAUGGAUGUUCAAAG-CCCUGCUCCACC
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